Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AP001005.1-201ENST00000571755 1248 ntBASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 AC005593.1-201ENST00000624894 515 ntBASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 AL512652.2-201ENST00000625156 1716 ntBASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.4■□□□□ 0.06
CTPS2Q9NRF8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC093909.1-201ENST00000504731 1122 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 MPDU1-223ENST00000582151 728 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC008667.4-201ENST00000607370 168 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 GGTLC5P-201ENST00000617623 998 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC117500.6-201ENST00000624871 588 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 PGM5P2-202ENST00000637225 1043 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AC063926.3-201ENST00000624734 5658 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 AP002414.2-201ENST00000591780 3365 ntBASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CTPS2Q9NRF8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 LINC00554-201ENST00000564841 3011 ntBASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 GGT3P-204ENST00000453783 1664 ntBASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 SLC25A6P2-201ENST00000497974 877 ntBASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 IGHV3-65-201ENST00000523210 341 ntBASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.38■□□□□ 0.05
CTPS2Q9NRF8 AC116407.3-201ENST00000623905 1129 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms