Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KRCC1Q9NPI7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 MIR3652-201ENST00000579335 131 ntBASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 AC008608.2-201ENST00000606089 416 ntBASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 CICP6-201ENST00000457191 2729 ntBASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 AC129492.6-201ENST00000611383 1305 ntBASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KRCC1Q9NPI7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 LAGE3P1-201ENST00000425356 484 ntBASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
KRCC1Q9NPI7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRCC1Q9NPI7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms