Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLK4Q9HAZ1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLK4Q9HAZ1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLK4Q9HAZ1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLK4Q9HAZ1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CLK4Q9HAZ1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 AL022342.1-201ENST00000400363 863 ntBASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 AP002490.2-201ENST00000524791 560 ntBASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 MIR4751-201ENST00000578027 74 ntBASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 TOP3BP1-201ENST00000420768 1380 ntBASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 AC002310.6-201ENST00000624451 1377 ntBASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLK4Q9HAZ1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 PMS2P1-201ENST00000431037 1228 ntBASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.07■□□□□ 0.16
CLK4Q9HAZ1 FAM185BP-201ENST00000443595 716 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms