Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDH11XQ9BZA7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 AC036164.1-201ENST00000570544 333 ntBASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11XQ9BZA7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11XQ9BZA7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11XQ9BZA7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PCDH11XQ9BZA7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11XQ9BZA7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11XQ9BZA7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11XQ9BZA7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 RN7SL399P-201ENST00000471648 279 ntBASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11XQ9BZA7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 AL442647.2-201ENST00000429864 857 ntBASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 KRT43P-201ENST00000434019 910 ntBASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 AC104989.1-201ENST00000519711 778 ntBASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11XQ9BZA7 BTNL10-201ENST00000595971 695 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms