Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 AC138894.3-201ENST00000603787 634 ntBASIC14.19□□□□□ -0.14
NICN1Q9BSH3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 NPAP1P7-201ENST00000613027 823 ntBASIC14.19□□□□□ -0.14
NICN1Q9BSH3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.19□□□□□ -0.14
NICN1Q9BSH3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.19□□□□□ -0.14
NICN1Q9BSH3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AC087388.1-201ENST00000571370 1112 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 NKAPP1-205ENST00000585790 367 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AL139424.1-201ENST00000607572 797 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AC092119.3-201ENST00000612618 583 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AL022326.1-202ENST00000641533 845 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 AC104640.1-201ENST00000562617 2109 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 PCGF3-213ENST00000620529 1899 ntBASIC14.18□□□□□ -0.14
NICN1Q9BSH3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.18□□□□□ -0.14
NICN1Q9BSH3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PRAL-201ENST00000624952 3286 ntBASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 AC087163.2-201ENST00000457299 853 ntBASIC14.17□□□□□ -0.14
NICN1Q9BSH3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.17□□□□□ -0.14
NICN1Q9BSH3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms