Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC140658.5-201ENST00000438532 169 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC107918.2-201ENST00000530817 355 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC124947.2-201ENST00000547118 1133 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SNHG9-202ENST00000564014 471 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 MIR4469-201ENST00000583919 79 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 AC104581.4-201ENST00000623126 3052 ntBASIC14.81□□□□□ -0.04
USB1Q9BQ65 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.81□□□□□ -0.04
USB1Q9BQ65 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
USB1Q9BQ65 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 YY1P1-201ENST00000427625 668 ntBASIC14.8□□□□□ -0.04
USB1Q9BQ65 FAM58CP-201ENST00000435741 640 ntBASIC14.8□□□□□ -0.04
USB1Q9BQ65 CEND1P1-201ENST00000451006 455 ntBASIC14.8□□□□□ -0.04
USB1Q9BQ65 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 AL161645.1-201ENST00000622716 1255 ntBASIC14.8□□□□□ -0.04
USB1Q9BQ65 AC055717.3-201ENST00000622967 595 ntBASIC14.8□□□□□ -0.04
USB1Q9BQ65 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.8□□□□□ -0.04
USB1Q9BQ65 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
USB1Q9BQ65 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms