Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
VRK1Q99986 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK1Q99986 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK1Q99986 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VRK1Q99986 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VRK1Q99986 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
VRK1Q99986 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.63□□□□□ -0.07
VRK1Q99986 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.63□□□□□ -0.07
VRK1Q99986 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.63□□□□□ -0.07
VRK1Q99986 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 LYSMD4-203ENST00000378904 2122 ntBASIC14.63□□□□□ -0.07
VRK1Q99986 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 AC092068.3-201ENST00000587894 2016 ntBASIC14.63□□□□□ -0.07
VRK1Q99986 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK1Q99986 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK1Q99986 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VRK1Q99986 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.62□□□□□ -0.07
VRK1Q99986 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.62□□□□□ -0.07
VRK1Q99986 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VRK1Q99986 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.62□□□□□ -0.07
VRK1Q99986 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VRK1Q99986 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.62□□□□□ -0.07
VRK1Q99986 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.62□□□□□ -0.07
VRK1Q99986 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.62□□□□□ -0.07
VRK1Q99986 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.62□□□□□ -0.07
VRK1Q99986 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.62□□□□□ -0.07
VRK1Q99986 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 AC092865.6-201ENST00000642101 219 ntBASIC14.62□□□□□ -0.07
VRK1Q99986 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 BCAR1-209ENST00000546196 1340 ntBASIC14.62□□□□□ -0.07
VRK1Q99986 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VRK1Q99986 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VRK1Q99986 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 PAUPAR-201ENST00000630360 2965 ntBASIC14.61□□□□□ -0.07
VRK1Q99986 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.61□□□□□ -0.07
VRK1Q99986 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VRK1Q99986 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VRK1Q99986 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms