Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF2Q99496 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 ACTG1P4-201ENST00000425123 1122 ntBASIC13.19□□□□□ -0.3
RNF2Q99496 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF2Q99496 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF2Q99496 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 AP001269.4-201ENST00000609611 512 ntBASIC13.19□□□□□ -0.3
RNF2Q99496 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF2Q99496 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RNF2Q99496 AC092364.2-201ENST00000596710 2692 ntBASIC13.19□□□□□ -0.3
RNF2Q99496 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 AP005117.1-201ENST00000584346 1413 ntBASIC13.19□□□□□ -0.3
RNF2Q99496 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RNF2Q99496 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
RNF2Q99496 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 AL161772.1-201ENST00000610494 4412 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 AC079328.2-201ENST00000561241 3354 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 DBET-201ENST00000630918 3363 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RNF2Q99496 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 SPDYE21P-201ENST00000413323 827 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 AL020989.1-201ENST00000422979 469 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.18□□□□□ -0.3
RNF2Q99496 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RNF2Q99496 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.18□□□□□ -0.3
RNF2Q99496 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.18□□□□□ -0.3
RNF2Q99496 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms