Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 AC106886.4-201ENST00000623557 2502 ntBASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK5RAP1Q96SZ6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 MIR943-201ENST00000401286 94 ntBASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 RNA5SP421-201ENST00000516864 134 ntBASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 AC011467.4-201ENST00000594891 528 ntBASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK5RAP1Q96SZ6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDK5RAP1Q96SZ6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms