Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 Z83836.1-201ENST00000624605 1642 ntBASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP6Q96FZ7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP6Q96FZ7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP6Q96FZ7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP6Q96FZ7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 AL109954.1-202ENST00000564051 2148 ntBASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CICP24-201ENST00000605464 2705 ntBASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 AC067930.6-201ENST00000623257 4947 ntBASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP6Q96FZ7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 AC026748.1-201ENST00000624349 3251 ntBASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms