Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.52■□□□□ 0.4
SHC3Q92529 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.52■□□□□ 0.4
SHC3Q92529 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 AL355306.1-201ENST00000415580 579 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 MCCD1P2-201ENST00000423228 335 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 ADH5P3-201ENST00000433842 1137 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 PRYP6-201ENST00000514804 343 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.52■□□□□ 0.4
SHC3Q92529 AC002347.1-201ENST00000569543 541 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SHC3Q92529 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.52■□□□□ 0.4
SHC3Q92529 AC092902.6-201ENST00000641783 218 ntBASIC17.52■□□□□ 0.4
SHC3Q92529 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.52■□□□□ 0.4
SHC3Q92529 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHC3Q92529 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SHC3Q92529 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC3Q92529 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SHC3Q92529 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SHC3Q92529 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
SHC3Q92529 AC010491.1-201ENST00000563101 2797 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC3Q92529 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SHC3Q92529 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SHC3Q92529 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC3Q92529 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SHC3Q92529 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 MIR940-201ENST00000401276 94 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 CDC14C-201ENST00000428251 1719 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC3Q92529 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC3Q92529 POLD2P1-201ENST00000511220 997 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC3Q92529 AC073389.1-201ENST00000595595 795 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SHC3Q92529 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.51■□□□□ 0.39
SHC3Q92529 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC3Q92529 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.51■□□□□ 0.39
SHC3Q92529 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.51■□□□□ 0.39
SHC3Q92529 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SHC3Q92529 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
SHC3Q92529 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.51■□□□□ 0.39
SHC3Q92529 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHC3Q92529 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 AKAP8P1-201ENST00000434743 1349 ntBASIC17.5■□□□□ 0.39
SHC3Q92529 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SHC3Q92529 AC069224.1-201ENST00000566372 1715 ntBASIC17.5■□□□□ 0.39
SHC3Q92529 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 AC004832.2-201ENST00000426397 482 ntBASIC17.5■□□□□ 0.39
SHC3Q92529 FAM58CP-201ENST00000435741 640 ntBASIC17.5■□□□□ 0.39
SHC3Q92529 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 AL138918.1-201ENST00000568306 659 ntBASIC17.5■□□□□ 0.39
SHC3Q92529 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.5■□□□□ 0.39
SHC3Q92529 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHC3Q92529 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SHC3Q92529 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms