Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 SART3-203ENST00000546611 1184 ntBASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AD001527.2-201ENST00000622994 785 ntBASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 PMPCAP1-201ENST00000508114 1576 ntBASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 AC067930.6-201ENST00000623257 4947 ntBASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC018712.1-201ENST00000455767 687 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 DUX4L17-201ENST00000557360 1267 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC021087.4-201ENST00000563761 564 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 NKAPP1-205ENST00000585790 367 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC013467.2-201ENST00000605472 835 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 AC148477.8-201ENST00000624298 468 ntBASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB40AQ8WXH6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB40AQ8WXH6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms