Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.13■□□□□ 0.17
ATL1Q8WXF7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AC025580.3-201ENST00000617932 1424 ntBASIC16.12■□□□□ 0.17
ATL1Q8WXF7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.12■□□□□ 0.17
ATL1Q8WXF7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AC006449.5-201ENST00000610658 2098 ntBASIC16.12■□□□□ 0.17
ATL1Q8WXF7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 PKD1P5-201ENST00000532415 10291 ntBASIC16.12■□□□□ 0.17
ATL1Q8WXF7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATL1Q8WXF7 AC092850.2-201ENST00000623821 2697 ntBASIC16.12■□□□□ 0.17
ATL1Q8WXF7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.11■□□□□ 0.17
ATL1Q8WXF7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 MED15P5-201ENST00000423150 992 ntBASIC16.11■□□□□ 0.17
ATL1Q8WXF7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC140658.5-201ENST00000438532 169 ntBASIC16.11■□□□□ 0.17
ATL1Q8WXF7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 KRT19P2-202ENST00000557173 1012 ntBASIC16.11■□□□□ 0.17
ATL1Q8WXF7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AL009183.1-201ENST00000603760 355 ntBASIC16.11■□□□□ 0.17
ATL1Q8WXF7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms