Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 AP000867.4-201ENST00000641616 219 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB3IL1Q8TBN0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 AC011498.5-201ENST00000592027 486 ntBASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 KRT8P39-201ENST00000396270 1433 ntBASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 AC023824.1-201ENST00000562945 2975 ntBASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB3IL1Q8TBN0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 LINC01238-205ENST00000567549 1107 ntBASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB3IL1Q8TBN0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms