Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 PCDHB19P-201ENST00000570871 2371 ntBASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC148Q8NFR7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC148Q8NFR7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 AC008894.3-201ENST00000624324 3103 ntBASIC18.96■□□□□ 0.63
CCDC148Q8NFR7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC148Q8NFR7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms