Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 AC108860.2-201ENST00000562760 2183 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 GPS2P2-201ENST00000430745 888 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 KLF2P3-201ENST00000451977 1087 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 AL390754.1-201ENST00000619088 582 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 AL023806.1-201ENST00000603994 1649 ntBASIC17.32■□□□□ 0.36
TTC16Q8NEE8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TTC16Q8NEE8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 TREML5P-201ENST00000421694 576 ntBASIC17.31■□□□□ 0.36
TTC16Q8NEE8 AC107890.1-201ENST00000422478 521 ntBASIC17.31■□□□□ 0.36
TTC16Q8NEE8 INGX-202ENST00000489074 768 ntBASIC17.31■□□□□ 0.36
TTC16Q8NEE8 AC069262.1-201ENST00000539058 672 ntBASIC17.31■□□□□ 0.36
TTC16Q8NEE8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
TTC16Q8NEE8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.3■□□□□ 0.36
TTC16Q8NEE8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms