Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CPEB3Q8NE35 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 AC112191.1-201ENST00000523689 701 ntBASIC14.42□□□□□ -0.1
CPEB3Q8NE35 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 AC020765.3-201ENST00000613051 740 ntBASIC14.42□□□□□ -0.1
CPEB3Q8NE35 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CPEB3Q8NE35 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AC002056.1-201ENST00000395613 760 ntBASIC14.41□□□□□ -0.1
CPEB3Q8NE35 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.41□□□□□ -0.1
CPEB3Q8NE35 MIR3687-2-201ENST00000577708 61 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms