Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 HLA-J-202ENST00000469281 1241 ntBASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 PGAM5P1-201ENST00000518923 814 ntBASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 AC023141.13-201ENST00000604991 943 ntBASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 FAM197Y3-203ENST00000618346 717 ntBASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SIMC1Q8NDZ2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 RNU1-129P-201ENST00000384064 167 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 RNA5SP416-201ENST00000516838 111 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AL031432.2-201ENST00000566714 459 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AL928711.1-201ENST00000570165 459 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 U1.21-201ENST00000580816 167 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AC105917.1-201ENST00000506637 2539 ntBASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SIMC1Q8NDZ2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms