Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 AL009178.2-201ENST00000597278 2719 ntBASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NANOGP1Q8N7R0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PAWRP1-201ENST00000451083 565 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AC091167.2-201ENST00000579581 588 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AC020765.3-201ENST00000613051 740 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AC006011.2-201ENST00000621313 1158 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 REXO1L3P-201ENST00000622202 1288 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
NANOGP1Q8N7R0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 AL671277.2-201ENST00000458060 996 ntBASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 NTF6B-201ENST00000591913 560 ntBASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 BNIP3P18-201ENST00000593976 575 ntBASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 CYP2A7P1-201ENST00000595391 815 ntBASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NANOGP1Q8N7R0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms