Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 AL023806.1-201ENST00000603994 1649 ntBASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.95■□□□□ 0.3
NPAS3Q8IXF0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AL645728.1-201ENST00000366221 2101 ntBASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AP002490.2-201ENST00000524791 560 ntBASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC055876.2-201ENST00000531834 546 ntBASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 SRD5A3P1-201ENST00000603021 949 ntBASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NPAS3Q8IXF0 PKD1P1-201ENST00000458669 6805 ntBASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 GPAA1P2-202ENST00000606848 1787 ntBASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NPAS3Q8IXF0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 AL031731.1-201ENST00000642131 2094 ntBASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NPAS3Q8IXF0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms