Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 AC005622.1-201ENST00000636801 1703 ntBASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 AC079776.4-201ENST00000511039 504 ntBASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDKL3Q8IVW4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 AL592424.1-201ENST00000563624 1536 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 RHOQP3-201ENST00000437982 621 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 AC009078.2-202ENST00000463353 338 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 AC007064.4-201ENST00000637740 555 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 AC008741.2-201ENST00000612792 3115 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 HLA-A-201ENST00000376802 1334 ntBASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDKL3Q8IVW4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AC024909.3-201ENST00000611513 2257 ntBASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AL603832.2-201ENST00000566195 2125 ntBASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.91■□□□□ 0.3
CDKL3Q8IVW4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms