Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RAB43Q86YS6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB43Q86YS6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB43Q86YS6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB43Q86YS6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB43Q86YS6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
RAB43Q86YS6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB43Q86YS6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAB43Q86YS6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB43Q86YS6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 EGFEM1P-202ENST00000431685 1563 ntBASIC15.79■□□□□ 0.12
RAB43Q86YS6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AC092850.2-201ENST00000623821 2697 ntBASIC15.79■□□□□ 0.12
RAB43Q86YS6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 HMGA1P7-201ENST00000406908 502 ntBASIC15.79■□□□□ 0.12
RAB43Q86YS6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AC067863.1-201ENST00000494933 530 ntBASIC15.79■□□□□ 0.12
RAB43Q86YS6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB43Q86YS6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB43Q86YS6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 KRT18P32-201ENST00000424695 1287 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 KRT8P48-201ENST00000515599 1220 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 AL135744.1-201ENST00000565098 629 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 AC091167.2-201ENST00000579581 588 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB43Q86YS6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 AP001350.2-201ENST00000625104 1094 ntBASIC15.78■□□□□ 0.12
RAB43Q86YS6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RAB43Q86YS6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms