Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC25Q86WR0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 TMPOP1-202ENST00000424642 1267 ntBASIC17.08■□□□□ 0.32
CCDC25Q86WR0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 AP002383.4-201ENST00000442518 975 ntBASIC17.08■□□□□ 0.32
CCDC25Q86WR0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 AC073592.4-201ENST00000623827 446 ntBASIC17.08■□□□□ 0.32
CCDC25Q86WR0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC25Q86WR0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AC126177.1-201ENST00000547829 2218 ntBASIC17.07■□□□□ 0.32
CCDC25Q86WR0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 RCN1P1-201ENST00000400413 996 ntBASIC17.07■□□□□ 0.32
CCDC25Q86WR0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 BX005266.1-201ENST00000473402 457 ntBASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AP000867.3-201ENST00000524675 377 ntBASIC17.07■□□□□ 0.32
CCDC25Q86WR0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 AL590326.2-201ENST00000625139 305 ntBASIC17.07■□□□□ 0.32
CCDC25Q86WR0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC25Q86WR0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 AC073347.1-201ENST00000421633 2643 ntBASIC17.06■□□□□ 0.32
CCDC25Q86WR0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC25Q86WR0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms