Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AP001269.4-201ENST00000609611 512 ntBASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AC116407.4-201ENST00000623319 1061 ntBASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRRTM1Q86UE6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 AL022326.1-202ENST00000641533 845 ntBASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PRAL-201ENST00000624952 3286 ntBASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRRTM1Q86UE6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 AC006058.4-201ENST00000624016 1670 ntBASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
LRRTM1Q86UE6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 RCN1P1-201ENST00000400413 996 ntBASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 AC104819.1-201ENST00000504587 486 ntBASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MIR3180-1-201ENST00000580374 94 ntBASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 MIR3180-3-201ENST00000584616 94 ntBASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
LRRTM1Q86UE6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms