Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.46■□□□□ 0.23
LDB1Q86U70 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 AL513523.2-202ENST00000427283 2040 ntBASIC16.46■□□□□ 0.23
LDB1Q86U70 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.46■□□□□ 0.23
LDB1Q86U70 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.46■□□□□ 0.23
LDB1Q86U70 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LDB1Q86U70 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LDB1Q86U70 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LDB1Q86U70 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 MED15P5-201ENST00000423150 992 ntBASIC16.45■□□□□ 0.22
LDB1Q86U70 KRT18P3-201ENST00000451602 1288 ntBASIC16.45■□□□□ 0.22
LDB1Q86U70 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 AL009183.1-201ENST00000603760 355 ntBASIC16.45■□□□□ 0.22
LDB1Q86U70 AC020765.3-201ENST00000613051 740 ntBASIC16.45■□□□□ 0.22
LDB1Q86U70 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 AC006449.6-201ENST00000612330 2296 ntBASIC16.45■□□□□ 0.22
LDB1Q86U70 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
LDB1Q86U70 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LDB1Q86U70 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
LDB1Q86U70 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LDB1Q86U70 MTHFR-217ENST00000641820 1569 ntBASIC16.44■□□□□ 0.22
LDB1Q86U70 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB1Q86U70 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB1Q86U70 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 PMS2P4-201ENST00000412466 1052 ntBASIC16.44■□□□□ 0.22
LDB1Q86U70 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.44■□□□□ 0.22
LDB1Q86U70 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.44■□□□□ 0.22
LDB1Q86U70 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.44■□□□□ 0.22
LDB1Q86U70 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.44■□□□□ 0.22
LDB1Q86U70 AC021097.1-201ENST00000607902 574 ntBASIC16.44■□□□□ 0.22
LDB1Q86U70 AC027601.4-201ENST00000611259 610 ntBASIC16.44■□□□□ 0.22
LDB1Q86U70 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
LDB1Q86U70 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB1Q86U70 AC005622.1-201ENST00000636801 1703 ntBASIC16.44■□□□□ 0.22
LDB1Q86U70 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.44■□□□□ 0.22
LDB1Q86U70 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LDB1Q86U70 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LDB1Q86U70 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LDB1Q86U70 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms