Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 AC211486.1-202ENST00000416371 468 ntBASIC11□□□□□ -0.65
SCXQ7RTU7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11□□□□□ -0.65
SCXQ7RTU7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 AC211476.1-201ENST00000503899 468 ntBASIC11□□□□□ -0.65
SCXQ7RTU7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11□□□□□ -0.65
SCXQ7RTU7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11□□□□□ -0.65
SCXQ7RTU7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 AC004790.2-201ENST00000623588 572 ntBASIC11□□□□□ -0.65
SCXQ7RTU7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11□□□□□ -0.65
SCXQ7RTU7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11□□□□□ -0.65
SCXQ7RTU7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11□□□□□ -0.65
SCXQ7RTU7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SCXQ7RTU7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 MRPL20P1-201ENST00000400819 433 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 ATP6V0CP3-201ENST00000417255 467 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 MCCD1P2-201ENST00000423228 335 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 PRSS29P-201ENST00000440800 595 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 DNAJB3-202ENST00000449667 1266 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 HCG4B-203ENST00000450128 991 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 AC010654.1-201ENST00000615722 808 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 PCDHB17P-201ENST00000539533 2393 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 GPR89P-201ENST00000407924 1495 ntBASIC10.99□□□□□ -0.65
SCXQ7RTU7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC10.99□□□□□ -0.65
SCXQ7RTU7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SCXQ7RTU7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms