Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 AC087386.2-201ENST00000623212 4637 ntBASIC14.46□□□□□ -0.1
C11orf88Q6PI97 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
C11orf88Q6PI97 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 TOB2P1-201ENST00000469761 992 ntBASIC14.45□□□□□ -0.1
C11orf88Q6PI97 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.45□□□□□ -0.1
C11orf88Q6PI97 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 AL353692.3-201ENST00000407031 1396 ntBASIC14.45□□□□□ -0.1
C11orf88Q6PI97 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 AC126177.1-201ENST00000547829 2218 ntBASIC14.45□□□□□ -0.1
C11orf88Q6PI97 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
C11orf88Q6PI97 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
C11orf88Q6PI97 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms