Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TPGS2Q68CL5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 AC078925.2-201ENST00000624013 1973 ntBASIC17.09■□□□□ 0.33
TPGS2Q68CL5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 FO393414.2-201ENST00000405153 598 ntBASIC17.09■□□□□ 0.33
TPGS2Q68CL5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 DOC2GP-202ENST00000514950 1163 ntBASIC17.09■□□□□ 0.33
TPGS2Q68CL5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.09■□□□□ 0.33
TPGS2Q68CL5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPGS2Q68CL5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.08■□□□□ 0.33
TPGS2Q68CL5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 CU639417.3-201ENST00000624240 1404 ntBASIC17.08■□□□□ 0.32
TPGS2Q68CL5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 COX5BP8-201ENST00000416911 349 ntBASIC17.08■□□□□ 0.32
TPGS2Q68CL5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.08■□□□□ 0.32
TPGS2Q68CL5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 SPDYE19P-201ENST00000338590 713 ntBASIC17.07■□□□□ 0.32
TPGS2Q68CL5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.07■□□□□ 0.32
TPGS2Q68CL5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms