Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.53■□□□□ 0.08
CDCP2Q5VXM1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AL391256.1-201ENST00000443260 1855 ntBASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AC092068.3-201ENST00000587894 2016 ntBASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AP005482.1-201ENST00000563722 1273 ntBASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 AC074044.1-201ENST00000609673 707 ntBASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 COX11-210ENST00000639671 696 ntBASIC15.52■□□□□ 0.08
CDCP2Q5VXM1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 GPAA1P2-202ENST00000606848 1787 ntBASIC15.52■□□□□ 0.07
CDCP2Q5VXM1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 AC092658.1-201ENST00000505836 891 ntBASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCP2Q5VXM1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDCP2Q5VXM1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms