Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LGSNQ5TDP6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AC087163.2-201ENST00000457299 853 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AC106795.1-205ENST00000512851 1056 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 MIR3180-1-201ENST00000580374 94 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 MIR3180-3-201ENST00000584616 94 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 NKAPP1-205ENST00000585790 367 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AL445228.2-201ENST00000605589 952 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AP001269.4-201ENST00000609611 512 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AP005117.1-202ENST00000581724 1908 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 AC104640.1-201ENST00000562617 2109 ntBASIC16.66■□□□□ 0.26
LGSNQ5TDP6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LGSNQ5TDP6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 AL356309.3-201ENST00000624132 1934 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 RBM17P3-201ENST00000417687 1192 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 AL353732.1-201ENST00000569618 1459 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
LGSNQ5TDP6 AL161772.1-201ENST00000610494 4412 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 AC103702.1-201ENST00000548801 2630 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.65■□□□□ 0.26
LGSNQ5TDP6 LINC00554-201ENST00000564841 3011 ntBASIC16.64■□□□□ 0.26
LGSNQ5TDP6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LGSNQ5TDP6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms