Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TOMM22P5-201ENST00000416399 439 ntBASIC20.43■□□□□ 0.86
RC3H1Q5TC82 AC074338.1-201ENST00000416825 156 ntBASIC20.43■□□□□ 0.86
RC3H1Q5TC82 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RC3H1Q5TC82 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 AP001889.1-201ENST00000525414 633 ntBASIC20.42■□□□□ 0.86
RC3H1Q5TC82 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 AL603756.1-201ENST00000606511 2163 ntBASIC20.42■□□□□ 0.86
RC3H1Q5TC82 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RC3H1Q5TC82 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RC3H1Q5TC82 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 BCRP2-202ENST00000447763 634 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 GGT3P-204ENST00000453783 1664 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 BCRP6-201ENST00000510112 632 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 BCRP7-201ENST00000511549 544 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AC068587.3-201ENST00000526613 355 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 PTP4A1P2-201ENST00000546033 454 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RC3H1Q5TC82 AC124283.3-201ENST00000570869 594 ntBASIC20.4■□□□□ 0.86
RC3H1Q5TC82 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms