Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 AC007950.2-201ENST00000615045 2347 ntBASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RPL39P5Q59GN2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.52□□□□□ -0.24
RPL39P5Q59GN2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 PRSS29P-201ENST00000440800 595 ntBASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 AC093909.1-201ENST00000504731 1122 ntBASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 UNC93B6-202ENST00000528242 690 ntBASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 MIR4515-201ENST00000584082 81 ntBASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P5Q59GN2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P5Q59GN2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms