Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USH1GQ495M9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
USH1GQ495M9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.85■□□□□ 0.61
USH1GQ495M9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USH1GQ495M9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.85■□□□□ 0.61
USH1GQ495M9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USH1GQ495M9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USH1GQ495M9 AL589702.1-201ENST00000641229 1509 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.84■□□□□ 0.61
USH1GQ495M9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
USH1GQ495M9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.84■□□□□ 0.61
USH1GQ495M9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 AL353705.2-201ENST00000428243 662 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 MTND6P24-201ENST00000440466 518 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.84■□□□□ 0.61
USH1GQ495M9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 RNA5SP421-201ENST00000516864 134 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.84■□□□□ 0.61
USH1GQ495M9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.84■□□□□ 0.61
USH1GQ495M9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.84■□□□□ 0.61
USH1GQ495M9 SPDYE12P-201ENST00000618416 771 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USH1GQ495M9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 LTB4R2-202ENST00000528054 3092 ntBASIC18.84■□□□□ 0.61
USH1GQ495M9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USH1GQ495M9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
USH1GQ495M9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.83■□□□□ 0.61
USH1GQ495M9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 AC005052.1-201ENST00000625181 2492 ntBASIC18.83■□□□□ 0.61
USH1GQ495M9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
USH1GQ495M9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.83■□□□□ 0.61
USH1GQ495M9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
USH1GQ495M9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
USH1GQ495M9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USH1GQ495M9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.83■□□□□ 0.6
USH1GQ495M9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.83■□□□□ 0.6
USH1GQ495M9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.83■□□□□ 0.6
USH1GQ495M9 AC027369.6-201ENST00000525520 931 ntBASIC18.83■□□□□ 0.6
USH1GQ495M9 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.83■□□□□ 0.6
USH1GQ495M9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.83■□□□□ 0.6
USH1GQ495M9 AC073592.8-201ENST00000624126 511 ntBASIC18.83■□□□□ 0.6
USH1GQ495M9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.83■□□□□ 0.6
USH1GQ495M9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.83■□□□□ 0.6
USH1GQ495M9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USH1GQ495M9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USH1GQ495M9 AD000864.1-201ENST00000624076 2295 ntBASIC18.83■□□□□ 0.6
USH1GQ495M9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USH1GQ495M9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
USH1GQ495M9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.82■□□□□ 0.6
USH1GQ495M9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USH1GQ495M9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
USH1GQ495M9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.82■□□□□ 0.6
USH1GQ495M9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.82■□□□□ 0.6
USH1GQ495M9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USH1GQ495M9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.82■□□□□ 0.6
USH1GQ495M9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USH1GQ495M9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.82■□□□□ 0.6
USH1GQ495M9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USH1GQ495M9 UGT1A2P-201ENST00000454886 866 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms