Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 SPDYE17-201ENST00000412399 783 ntBASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 AC004461.2-201ENST00000629517 803 ntBASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 FLJ38576-201ENST00000623820 2459 ntBASIC19.06■□□□□ 0.64
SHROOM1Q2M3G4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 DOC2GP-202ENST00000514950 1163 ntBASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 AC024267.1-201ENST00000582320 895 ntBASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 AC008494.3-201ENST00000606615 944 ntBASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 IGHV3-72-202ENST00000621503 303 ntBASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SHROOM1Q2M3G4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 HIST3H2BA-201ENST00000436555 524 ntBASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 U91328.1-201ENST00000437528 223 ntBASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 AC114501.2-201ENST00000439631 535 ntBASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHROOM1Q2M3G4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.03■□□□□ 0.64
SHROOM1Q2M3G4 CR383656.12-201ENST00000549567 513 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms