Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 AL589702.1-201ENST00000641229 1509 ntBASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 AP3S2-216ENST00000617003 1561 ntBASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 BANF1P1-201ENST00000553684 263 ntBASIC19.78■□□□□ 0.76
RFX7Q2KHR2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 AL365330.1-201ENST00000607459 531 ntBASIC19.78■□□□□ 0.76
RFX7Q2KHR2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX7Q2KHR2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX7Q2KHR2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.77■□□□□ 0.75
RFX7Q2KHR2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
RFX7Q2KHR2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX7Q2KHR2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RFX7Q2KHR2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX7Q2KHR2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 IGHV3-42-201ENST00000520410 361 ntBASIC19.76■□□□□ 0.75
RFX7Q2KHR2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AC018529.1-201ENST00000613063 361 ntBASIC19.76■□□□□ 0.75
RFX7Q2KHR2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX7Q2KHR2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RFX7Q2KHR2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms