Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.3□□□□□ -0.12
UBA52P62987 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.3□□□□□ -0.12
UBA52P62987 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.3□□□□□ -0.12
UBA52P62987 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.3□□□□□ -0.12
UBA52P62987 AC105339.3-201ENST00000560043 636 ntBASIC14.3□□□□□ -0.12
UBA52P62987 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.3□□□□□ -0.12
UBA52P62987 MIR3687-2-201ENST00000577708 61 ntBASIC14.3□□□□□ -0.12
UBA52P62987 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.3□□□□□ -0.12
UBA52P62987 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 MIR3687-1-201ENST00000614492 61 ntBASIC14.3□□□□□ -0.12
UBA52P62987 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.3□□□□□ -0.12
UBA52P62987 AC055717.3-201ENST00000622967 595 ntBASIC14.3□□□□□ -0.12
UBA52P62987 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBA52P62987 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBA52P62987 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBA52P62987 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 GPX1P2-201ENST00000429271 606 ntBASIC14.29□□□□□ -0.12
UBA52P62987 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 DNAJB3-201ENST00000446806 729 ntBASIC14.29□□□□□ -0.12
UBA52P62987 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.29□□□□□ -0.12
UBA52P62987 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.29□□□□□ -0.12
UBA52P62987 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 AC040169.1-201ENST00000565382 521 ntBASIC14.29□□□□□ -0.12
UBA52P62987 NKAPP1-205ENST00000585790 367 ntBASIC14.29□□□□□ -0.12
UBA52P62987 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 MTDHP4-201ENST00000600287 670 ntBASIC14.29□□□□□ -0.12
UBA52P62987 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 AC107918.4-202ENST00000641623 219 ntBASIC14.29□□□□□ -0.12
UBA52P62987 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
UBA52P62987 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBA52P62987 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.29□□□□□ -0.12
UBA52P62987 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBA52P62987 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms