Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 BCAR1-209ENST00000546196 1340 ntBASIC17.42■□□□□ 0.38
GSCP56915 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GSCP56915 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GSCP56915 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GSCP56915 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GSCP56915 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
GSCP56915 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
GSCP56915 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 AC007967.2-201ENST00000432613 625 ntBASIC17.41■□□□□ 0.38
GSCP56915 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 AC018845.2-201ENST00000568326 409 ntBASIC17.41■□□□□ 0.38
GSCP56915 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.41■□□□□ 0.38
GSCP56915 AC027601.4-201ENST00000611259 610 ntBASIC17.41■□□□□ 0.38
GSCP56915 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.41■□□□□ 0.38
GSCP56915 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
GSCP56915 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.41■□□□□ 0.38
GSCP56915 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GSCP56915 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.41■□□□□ 0.38
GSCP56915 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
GSCP56915 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.4■□□□□ 0.38
GSCP56915 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.4■□□□□ 0.38
GSCP56915 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 AC140113.2-201ENST00000604370 208 ntBASIC17.4■□□□□ 0.38
GSCP56915 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.4■□□□□ 0.38
GSCP56915 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GSCP56915 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.4■□□□□ 0.38
GSCP56915 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
GSCP56915 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
GSCP56915 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GSCP56915 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.39■□□□□ 0.38
GSCP56915 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GSCP56915 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
GSCP56915 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GSCP56915 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GSCP56915 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms