Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.26□□□□□ -0.45
CMC4P56277 SPTSSB-204ENST00000617024 1292 ntBASIC12.26□□□□□ -0.45
CMC4P56277 AL691403.2-201ENST00000618460 490 ntBASIC12.26□□□□□ -0.45
CMC4P56277 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 AL513210.1-201ENST00000629608 234 ntBASIC12.26□□□□□ -0.45
CMC4P56277 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CMC4P56277 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 UXT-AS1-201ENST00000590504 1525 ntBASIC12.26□□□□□ -0.45
CMC4P56277 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CMC4P56277 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CMC4P56277 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.26□□□□□ -0.45
CMC4P56277 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.25□□□□□ -0.45
CMC4P56277 CNN2P11-201ENST00000429351 262 ntBASIC12.25□□□□□ -0.45
CMC4P56277 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.25□□□□□ -0.45
CMC4P56277 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.25□□□□□ -0.45
CMC4P56277 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CMC4P56277 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 AC084121.4-201ENST00000641598 221 ntBASIC12.25□□□□□ -0.45
CMC4P56277 AC134684.3-201ENST00000641758 218 ntBASIC12.25□□□□□ -0.45
CMC4P56277 AF228730.8-201ENST00000642140 221 ntBASIC12.25□□□□□ -0.45
CMC4P56277 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.25□□□□□ -0.45
CMC4P56277 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 GGT4P-201ENST00000623672 1708 ntBASIC12.25□□□□□ -0.45
CMC4P56277 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 AC078925.2-201ENST00000624013 1973 ntBASIC12.25□□□□□ -0.45
CMC4P56277 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CMC4P56277 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.25□□□□□ -0.45
CMC4P56277 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CMC4P56277 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CMC4P56277 FZD10-202ENST00000539839 3282 ntBASIC12.24□□□□□ -0.45
CMC4P56277 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 MIR346-201ENST00000362234 95 ntBASIC12.24□□□□□ -0.45
CMC4P56277 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms