Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 KRT18P32-201ENST00000424695 1287 ntBASIC17.55■□□□□ 0.4
CDH8P55286 AC105233.2-201ENST00000523697 349 ntBASIC17.55■□□□□ 0.4
CDH8P55286 AF228730.5-201ENST00000530288 346 ntBASIC17.55■□□□□ 0.4
CDH8P55286 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH8P55286 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 AC084121.4-201ENST00000641598 221 ntBASIC17.55■□□□□ 0.4
CDH8P55286 AF228730.8-201ENST00000642140 221 ntBASIC17.55■□□□□ 0.4
CDH8P55286 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH8P55286 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CDH8P55286 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH8P55286 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH8P55286 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH8P55286 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDH8P55286 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDH8P55286 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH8P55286 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
CDH8P55286 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDH8P55286 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.54■□□□□ 0.4
CDH8P55286 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH8P55286 GPS2P2-201ENST00000430745 888 ntBASIC17.54■□□□□ 0.4
CDH8P55286 AC023141.5-201ENST00000458585 616 ntBASIC17.54■□□□□ 0.4
CDH8P55286 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH8P55286 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.54■□□□□ 0.4
CDH8P55286 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.54■□□□□ 0.4
CDH8P55286 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH8P55286 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH8P55286 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH8P55286 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 REXO1L8P-201ENST00000604378 1897 ntBASIC17.53■□□□□ 0.4
CDH8P55286 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH8P55286 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.53■□□□□ 0.4
CDH8P55286 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.53■□□□□ 0.4
CDH8P55286 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.53■□□□□ 0.4
CDH8P55286 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH8P55286 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 SPTSSB-204ENST00000617024 1292 ntBASIC17.53■□□□□ 0.4
CDH8P55286 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH8P55286 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH8P55286 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CDH8P55286 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH8P55286 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDH8P55286 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms