Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 ELL2P1-201ENST00000413990 1906 ntBASIC17.62■□□□□ 0.41
RAD23BP54727 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAD23BP54727 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAD23BP54727 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RAD23BP54727 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAD23BP54727 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.61■□□□□ 0.41
RAD23BP54727 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.61■□□□□ 0.41
RAD23BP54727 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 ACTG1P14-201ENST00000446382 1122 ntBASIC17.61■□□□□ 0.41
RAD23BP54727 KRT18P34-201ENST00000488218 1270 ntBASIC17.61■□□□□ 0.41
RAD23BP54727 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.61■□□□□ 0.41
RAD23BP54727 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.61■□□□□ 0.41
RAD23BP54727 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.61■□□□□ 0.41
RAD23BP54727 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAD23BP54727 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAD23BP54727 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RAD23BP54727 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 AC103702.1-201ENST00000548801 2630 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.6■□□□□ 0.41
RAD23BP54727 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.6■□□□□ 0.41
RAD23BP54727 TFAMP1-201ENST00000412727 736 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.6■□□□□ 0.41
RAD23BP54727 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.6■□□□□ 0.41
RAD23BP54727 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.6■□□□□ 0.41
RAD23BP54727 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.6■□□□□ 0.41
RAD23BP54727 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.6■□□□□ 0.41
RAD23BP54727 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.6■□□□□ 0.41
RAD23BP54727 AL135744.1-201ENST00000565098 629 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 MIR3687-2-201ENST00000577708 61 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 MIR4469-201ENST00000583919 79 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 MIR3687-1-201ENST00000614492 61 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 AC023511.2-201ENST00000618803 211 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 AKAP8P1-201ENST00000434743 1349 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 LINC01144-201ENST00000626198 1710 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAD23BP54727 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.6■□□□□ 0.41
RAD23BP54727 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAD23BP54727 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 LINC02199-201ENST00000506655 2702 ntBASIC17.6■□□□□ 0.41
RAD23BP54727 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAD23BP54727 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.6■□□□□ 0.41
RAD23BP54727 LINC00554-201ENST00000564841 3011 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms