Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATXN3P54252 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
ATXN3P54252 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATXN3P54252 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 MIR943-201ENST00000401286 94 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 AL355306.1-201ENST00000415580 579 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.9■□□□□ 0.3
ATXN3P54252 AC015922.1-201ENST00000421102 1152 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 RN7SL589P-201ENST00000481268 310 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.9■□□□□ 0.3
ATXN3P54252 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.9■□□□□ 0.3
ATXN3P54252 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.9■□□□□ 0.3
ATXN3P54252 AC087641.1-201ENST00000557561 1021 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.9■□□□□ 0.3
ATXN3P54252 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.9■□□□□ 0.3
ATXN3P54252 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
ATXN3P54252 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATXN3P54252 PCDHA1-201ENST00000378133 2726 ntBASIC16.9■□□□□ 0.3
ATXN3P54252 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
ATXN3P54252 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.89■□□□□ 0.3
ATXN3P54252 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.89■□□□□ 0.3
ATXN3P54252 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.89■□□□□ 0.3
ATXN3P54252 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.89■□□□□ 0.3
ATXN3P54252 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ATXN3P54252 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.89■□□□□ 0.3
ATXN3P54252 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATXN3P54252 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ATXN3P54252 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ATXN3P54252 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ATXN3P54252 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATXN3P54252 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.89■□□□□ 0.29
ATXN3P54252 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
ATXN3P54252 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.89■□□□□ 0.29
ATXN3P54252 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ATXN3P54252 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.89■□□□□ 0.29
ATXN3P54252 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.89■□□□□ 0.29
ATXN3P54252 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.89■□□□□ 0.29
ATXN3P54252 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATXN3P54252 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ATXN3P54252 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 AC129492.6-201ENST00000611383 1305 ntBASIC16.89■□□□□ 0.29
ATXN3P54252 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
ATXN3P54252 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATXN3P54252 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATXN3P54252 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ATXN3P54252 AC092171.3-201ENST00000610122 2651 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 AC068418.2-201ENST00000577309 3703 ntBASIC16.88■□□□□ 0.29
ATXN3P54252 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ATXN3P54252 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATXN3P54252 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms