Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GPC3P51654 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GPC3P51654 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GPC3P51654 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
GPC3P51654 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GPC3P51654 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
GPC3P51654 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
GPC3P51654 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GPC3P51654 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GPC3P51654 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.14■□□□□ 0.49
GPC3P51654 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 HLA-H-201ENST00000383620 1096 ntBASIC18.14■□□□□ 0.49
GPC3P51654 BASP1P1-201ENST00000430708 665 ntBASIC18.14■□□□□ 0.49
GPC3P51654 AC097493.3-201ENST00000509725 367 ntBASIC18.14■□□□□ 0.49
GPC3P51654 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.14■□□□□ 0.49
GPC3P51654 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.14■□□□□ 0.49
GPC3P51654 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.14■□□□□ 0.49
GPC3P51654 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.14■□□□□ 0.49
GPC3P51654 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.14■□□□□ 0.49
GPC3P51654 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.14■□□□□ 0.49
GPC3P51654 AJ011932.1-201ENST00000621707 465 ntBASIC18.14■□□□□ 0.49
GPC3P51654 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.14■□□□□ 0.49
GPC3P51654 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GPC3P51654 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GPC3P51654 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
GPC3P51654 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
GPC3P51654 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.13■□□□□ 0.49
GPC3P51654 FAM220BP-201ENST00000377689 816 ntBASIC18.13■□□□□ 0.49
GPC3P51654 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GPC3P51654 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.13■□□□□ 0.49
GPC3P51654 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC3P51654 AC092580.3-201ENST00000430932 139 ntBASIC18.13■□□□□ 0.49
GPC3P51654 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 IGHV3-42-201ENST00000520410 361 ntBASIC18.13■□□□□ 0.49
GPC3P51654 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC3P51654 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 AL390754.1-201ENST00000619088 582 ntBASIC18.13■□□□□ 0.49
GPC3P51654 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.13■□□□□ 0.49
GPC3P51654 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.13■□□□□ 0.49
GPC3P51654 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
GPC3P51654 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GPC3P51654 AL031731.1-201ENST00000642131 2094 ntBASIC18.13■□□□□ 0.49
GPC3P51654 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GPC3P51654 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.12■□□□□ 0.49
GPC3P51654 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.12■□□□□ 0.49
GPC3P51654 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.12■□□□□ 0.49
GPC3P51654 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 INGX-202ENST00000489074 768 ntBASIC18.12■□□□□ 0.49
GPC3P51654 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GPC3P51654 AC098859.1-201ENST00000502915 1238 ntBASIC18.12■□□□□ 0.49
GPC3P51654 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.12■□□□□ 0.49
GPC3P51654 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.12■□□□□ 0.49
GPC3P51654 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC3P51654 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC3P51654 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.12■□□□□ 0.49
GPC3P51654 AC003101.2-201ENST00000612557 442 ntBASIC18.12■□□□□ 0.49
GPC3P51654 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 AC007967.4-201ENST00000614700 386 ntBASIC18.12■□□□□ 0.49
GPC3P51654 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
GPC3P51654 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GPC3P51654 AL118508.1-201ENST00000613502 2345 ntBASIC18.12■□□□□ 0.49
GPC3P51654 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.12■□□□□ 0.49
GPC3P51654 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GPC3P51654 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GPC3P51654 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GPC3P51654 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GPC3P51654 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GPC3P51654 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GPC3P51654 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
GPC3P51654 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.11■□□□□ 0.49
GPC3P51654 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms