Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBP50607 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBP50607 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBP50607 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 AL391256.1-201ENST00000443260 1855 ntBASIC17.37■□□□□ 0.37
TUBP50607 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 AC106886.4-201ENST00000623557 2502 ntBASIC17.37■□□□□ 0.37
TUBP50607 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TUBP50607 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBP50607 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBP50607 AC025678.2-201ENST00000562061 970 ntBASIC17.37■□□□□ 0.37
TUBP50607 LINC00628-201ENST00000628516 1289 ntBASIC17.37■□□□□ 0.37
TUBP50607 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBP50607 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 KRT8P39-201ENST00000396270 1433 ntBASIC17.37■□□□□ 0.37
TUBP50607 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBP50607 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBP50607 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBP50607 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.36■□□□□ 0.37
TUBP50607 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TUBP50607 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBP50607 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.36■□□□□ 0.37
TUBP50607 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 CYMP-203ENST00000474680 1263 ntBASIC17.36■□□□□ 0.37
TUBP50607 KRT18P34-201ENST00000488218 1270 ntBASIC17.36■□□□□ 0.37
TUBP50607 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.36■□□□□ 0.37
TUBP50607 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBP50607 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 AL512356.2-201ENST00000546955 174 ntBASIC17.36■□□□□ 0.37
TUBP50607 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.36■□□□□ 0.37
TUBP50607 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.36■□□□□ 0.37
TUBP50607 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.36■□□□□ 0.37
TUBP50607 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.36■□□□□ 0.37
TUBP50607 AC093028.1-201ENST00000622998 982 ntBASIC17.36■□□□□ 0.37
TUBP50607 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBP50607 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.36■□□□□ 0.37
TUBP50607 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBP50607 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBP50607 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBP50607 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
TUBP50607 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 AGGF1P2-201ENST00000426656 2106 ntBASIC17.35■□□□□ 0.37
TUBP50607 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 RNF216P1-203ENST00000404404 2427 ntBASIC17.35■□□□□ 0.37
TUBP50607 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.35■□□□□ 0.37
TUBP50607 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TUBP50607 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms