Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.33■□□□□ 0.69
NEDD4P46934 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.33■□□□□ 0.69
NEDD4P46934 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.33■□□□□ 0.69
NEDD4P46934 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEDD4P46934 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.33■□□□□ 0.68
NEDD4P46934 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NEDD4P46934 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NEDD4P46934 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.33■□□□□ 0.68
NEDD4P46934 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NEDD4P46934 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEDD4P46934 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.33■□□□□ 0.68
NEDD4P46934 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.33■□□□□ 0.68
NEDD4P46934 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NEDD4P46934 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEDD4P46934 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.32■□□□□ 0.68
NEDD4P46934 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.32■□□□□ 0.68
NEDD4P46934 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 ALG1L8P-201ENST00000533887 760 ntBASIC19.32■□□□□ 0.68
NEDD4P46934 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.32■□□□□ 0.68
NEDD4P46934 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.32■□□□□ 0.68
NEDD4P46934 AC026150.2-201ENST00000564693 1156 ntBASIC19.32■□□□□ 0.68
NEDD4P46934 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.32■□□□□ 0.68
NEDD4P46934 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.32■□□□□ 0.68
NEDD4P46934 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.32■□□□□ 0.68
NEDD4P46934 LINC00628-201ENST00000628516 1289 ntBASIC19.32■□□□□ 0.68
NEDD4P46934 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.32■□□□□ 0.68
NEDD4P46934 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEDD4P46934 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEDD4P46934 AP3S2-216ENST00000617003 1561 ntBASIC19.32■□□□□ 0.68
NEDD4P46934 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.32■□□□□ 0.68
NEDD4P46934 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.32■□□□□ 0.68
NEDD4P46934 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.32■□□□□ 0.68
NEDD4P46934 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 KRT18P28-201ENST00000453838 1332 ntBASIC19.32■□□□□ 0.68
NEDD4P46934 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEDD4P46934 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
NEDD4P46934 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 HLA-J-203ENST00000494367 1087 ntBASIC19.31■□□□□ 0.68
NEDD4P46934 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.31■□□□□ 0.68
NEDD4P46934 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.31■□□□□ 0.68
NEDD4P46934 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 U82695.1-201ENST00000635752 1889 ntBASIC19.31■□□□□ 0.68
NEDD4P46934 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 AL592424.1-201ENST00000563624 1536 ntBASIC19.31■□□□□ 0.68
NEDD4P46934 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NEDD4P46934 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NEDD4P46934 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEDD4P46934 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 AC098859.1-201ENST00000502915 1238 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms