Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.13■□□□□ 0.49
RFC5P40937 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.13■□□□□ 0.49
RFC5P40937 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 DUX4L27-201ENST00000554796 1261 ntBASIC18.13■□□□□ 0.49
RFC5P40937 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC5P40937 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC5P40937 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.13■□□□□ 0.49
RFC5P40937 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC5P40937 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC5P40937 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC5P40937 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFC5P40937 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC5P40937 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RFC5P40937 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.12■□□□□ 0.49
RFC5P40937 U82695.1-201ENST00000635752 1889 ntBASIC18.12■□□□□ 0.49
RFC5P40937 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 MIR770-201ENST00000390219 98 ntBASIC18.12■□□□□ 0.49
RFC5P40937 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.12■□□□□ 0.49
RFC5P40937 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.12■□□□□ 0.49
RFC5P40937 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.12■□□□□ 0.49
RFC5P40937 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.12■□□□□ 0.49
RFC5P40937 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.12■□□□□ 0.49
RFC5P40937 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RFC5P40937 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
RFC5P40937 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RFC5P40937 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RFC5P40937 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC5P40937 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.12■□□□□ 0.49
RFC5P40937 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 MIR943-201ENST00000401286 94 ntBASIC18.11■□□□□ 0.49
RFC5P40937 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC5P40937 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 AL035456.1-201ENST00000456064 1369 ntBASIC18.11■□□□□ 0.49
RFC5P40937 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC5P40937 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.11■□□□□ 0.49
RFC5P40937 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.11■□□□□ 0.49
RFC5P40937 FLJ38576-201ENST00000623820 2459 ntBASIC18.11■□□□□ 0.49
RFC5P40937 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFC5P40937 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 AGGF1P2-201ENST00000426656 2106 ntBASIC18.1■□□□□ 0.49
RFC5P40937 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC5P40937 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC5P40937 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFC5P40937 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms