Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A5P29400 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL4A5P29400 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL4A5P29400 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.38■□□□□ 0.69
COL4A5P29400 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 AC006033.1-201ENST00000440505 426 ntBASIC19.38■□□□□ 0.69
COL4A5P29400 AL355864.2-201ENST00000447420 863 ntBASIC19.38■□□□□ 0.69
COL4A5P29400 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 VDAC1P7-201ENST00000462417 847 ntBASIC19.38■□□□□ 0.69
COL4A5P29400 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 RN7SL560P-201ENST00000577943 264 ntBASIC19.38■□□□□ 0.69
COL4A5P29400 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A5P29400 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
COL4A5P29400 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A5P29400 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A5P29400 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 AC006538.1-201ENST00000567905 1585 ntBASIC19.37■□□□□ 0.69
COL4A5P29400 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A5P29400 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
COL4A5P29400 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.37■□□□□ 0.69
COL4A5P29400 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A5P29400 AC010328.2-201ENST00000597698 1111 ntBASIC19.37■□□□□ 0.69
COL4A5P29400 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.37■□□□□ 0.69
COL4A5P29400 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL4A5P29400 AL691432.1-201ENST00000596308 1422 ntBASIC19.37■□□□□ 0.69
COL4A5P29400 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.37■□□□□ 0.69
COL4A5P29400 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A5P29400 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A5P29400 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL4A5P29400 AC009053.2-201ENST00000563701 2365 ntBASIC19.37■□□□□ 0.69
COL4A5P29400 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL4A5P29400 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 TOMM22P5-201ENST00000416399 439 ntBASIC19.36■□□□□ 0.69
COL4A5P29400 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A5P29400 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A5P29400 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A5P29400 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A5P29400 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A5P29400 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A5P29400 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COL4A5P29400 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A5P29400 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A5P29400 YBX1P6-201ENST00000442962 1002 ntBASIC19.36■□□□□ 0.69
COL4A5P29400 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A5P29400 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A5P29400 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A5P29400 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A5P29400 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COL4A5P29400 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A5P29400 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A5P29400 AC141586.5-201ENST00000624546 2050 ntBASIC19.35■□□□□ 0.69
COL4A5P29400 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
COL4A5P29400 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A5P29400 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.35■□□□□ 0.69
COL4A5P29400 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A5P29400 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms