Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
SHC1P29353 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 AC092919.2-201ENST00000623631 1645 ntBASIC15.14■□□□□ 0.01
SHC1P29353 AC006277.1-201ENST00000624348 1610 ntBASIC15.14■□□□□ 0.01
SHC1P29353 LINC00895-201ENST00000629028 1637 ntBASIC15.14■□□□□ 0.01
SHC1P29353 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 HMGA1P7-201ENST00000406908 502 ntBASIC15.14■□□□□ 0.01
SHC1P29353 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.14■□□□□ 0.01
SHC1P29353 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.14■□□□□ 0.01
SHC1P29353 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.14■□□□□ 0.01
SHC1P29353 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 CYP2A7P1-201ENST00000595391 815 ntBASIC15.14■□□□□ 0.01
SHC1P29353 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SHC1P29353 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHC1P29353 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
SHC1P29353 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 SNX33P1-201ENST00000592116 1762 ntBASIC15.13■□□□□ 0.01
SHC1P29353 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 AC012569.1-201ENST00000591191 1524 ntBASIC15.13■□□□□ 0.01
SHC1P29353 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SHC1P29353 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.13■□□□□ 0.01
SHC1P29353 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.13■□□□□ 0.01
SHC1P29353 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.13■□□□□ 0.01
SHC1P29353 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.13■□□□□ 0.01
SHC1P29353 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 MIR4515-201ENST00000584082 81 ntBASIC15.13■□□□□ 0.01
SHC1P29353 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHC1P29353 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SHC1P29353 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHC1P29353 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms