Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
GDF1P27539 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.93□□□□□ -0.02
GDF1P27539 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
GDF1P27539 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GDF1P27539 AC008677.1-201ENST00000519230 1561 ntBASIC14.93□□□□□ -0.02
GDF1P27539 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.93□□□□□ -0.02
GDF1P27539 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GDF1P27539 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.93□□□□□ -0.02
GDF1P27539 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.93□□□□□ -0.02
GDF1P27539 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 UBALD1-205ENST00000590891 2641 ntBASIC14.93□□□□□ -0.02
GDF1P27539 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDF1P27539 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.92□□□□□ -0.02
GDF1P27539 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 HLA-H-201ENST00000383620 1096 ntBASIC14.92□□□□□ -0.02
GDF1P27539 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 KLF2P3-201ENST00000451977 1087 ntBASIC14.92□□□□□ -0.02
GDF1P27539 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.92□□□□□ -0.02
GDF1P27539 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 RARRES2P9-201ENST00000565168 469 ntBASIC14.92□□□□□ -0.02
GDF1P27539 AC015911.4-201ENST00000588022 1070 ntBASIC14.92□□□□□ -0.02
GDF1P27539 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.92□□□□□ -0.02
GDF1P27539 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 HLA-A-202ENST00000376806 1854 ntBASIC14.92□□□□□ -0.02
GDF1P27539 PCGF3-213ENST00000620529 1899 ntBASIC14.92□□□□□ -0.02
GDF1P27539 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
GDF1P27539 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
GDF1P27539 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDF1P27539 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.91□□□□□ -0.02
GDF1P27539 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
GDF1P27539 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 AP3S2-216ENST00000617003 1561 ntBASIC14.91□□□□□ -0.02
GDF1P27539 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.91□□□□□ -0.02
GDF1P27539 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 MIR770-201ENST00000390219 98 ntBASIC14.91□□□□□ -0.02
GDF1P27539 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.91□□□□□ -0.02
GDF1P27539 AC107890.1-201ENST00000422478 521 ntBASIC14.91□□□□□ -0.02
GDF1P27539 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.91□□□□□ -0.02
GDF1P27539 RNA5SP410-201ENST00000516285 106 ntBASIC14.91□□□□□ -0.02
GDF1P27539 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.91□□□□□ -0.02
GDF1P27539 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 AC003101.2-201ENST00000612557 442 ntBASIC14.91□□□□□ -0.02
GDF1P27539 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.91□□□□□ -0.02
GDF1P27539 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms