Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CNTFRP26992 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNTFRP26992 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.28□□□□□ -0.28
CNTFRP26992 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTFRP26992 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTFRP26992 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CNTFRP26992 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.27□□□□□ -0.28
CNTFRP26992 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTFRP26992 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CNTFRP26992 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CNTFRP26992 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CNTFRP26992 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTFRP26992 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
CNTFRP26992 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNTFRP26992 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CNTFRP26992 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
CNTFRP26992 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.27□□□□□ -0.28
CNTFRP26992 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.27□□□□□ -0.29
CNTFRP26992 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 PDPK2P-202ENST00000562415 1191 ntBASIC13.27□□□□□ -0.29
CNTFRP26992 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.27□□□□□ -0.29
CNTFRP26992 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.27□□□□□ -0.29
CNTFRP26992 AL671883.3-201ENST00000603274 991 ntBASIC13.27□□□□□ -0.29
CNTFRP26992 AL009183.1-201ENST00000603760 355 ntBASIC13.27□□□□□ -0.29
CNTFRP26992 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.27□□□□□ -0.29
CNTFRP26992 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNTFRP26992 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.27□□□□□ -0.29
CNTFRP26992 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.26□□□□□ -0.29
CNTFRP26992 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.26□□□□□ -0.29
CNTFRP26992 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CNTFRP26992 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CNTFRP26992 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.26□□□□□ -0.29
CNTFRP26992 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.26□□□□□ -0.29
CNTFRP26992 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.26□□□□□ -0.29
CNTFRP26992 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNTFRP26992 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms