Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 AC092902.6-201ENST00000641783 218 ntBASIC14.12□□□□□ -0.15
TNFSF4P23510 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TNFSF4P23510 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.12□□□□□ -0.15
TNFSF4P23510 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 AD000864.1-201ENST00000624076 2295 ntBASIC14.12□□□□□ -0.15
TNFSF4P23510 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.12□□□□□ -0.15
TNFSF4P23510 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TNFSF4P23510 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
TNFSF4P23510 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.11□□□□□ -0.15
TNFSF4P23510 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 TFAMP1-201ENST00000412727 736 ntBASIC14.11□□□□□ -0.15
TNFSF4P23510 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 YBX1P5-201ENST00000509441 847 ntBASIC14.11□□□□□ -0.15
TNFSF4P23510 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.11□□□□□ -0.15
TNFSF4P23510 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.11□□□□□ -0.15
TNFSF4P23510 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.11□□□□□ -0.15
TNFSF4P23510 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 AC026120.1-201ENST00000611536 926 ntBASIC14.11□□□□□ -0.15
TNFSF4P23510 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.11□□□□□ -0.15
TNFSF4P23510 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TNFSF4P23510 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.11□□□□□ -0.15
TNFSF4P23510 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TNFSF4P23510 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TNFSF4P23510 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TNFSF4P23510 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 TIMM8BP1-201ENST00000452384 211 ntBASIC14.1□□□□□ -0.15
TNFSF4P23510 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms